MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,771
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 1,841
Total number of protein coding genes annotated/found:
1,771
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 89 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000009.1
SEQF5026_01841
Genome Viewer
NA
AA
495/165
86617-86123
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01840
Genome Viewer
NA
AA
1269/423
84784-86052
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01839
Genome Viewer
NA
AA
2100/700
82681-84780
Inducible ornithine decarboxylase
SEQF5026|JADGKX010000009.1
SEQF5026_01838
Genome Viewer
NA
AA
1482/494
82437-80956
Inner membrane transporter YcaM
SEQF5026|JADGKX010000009.1
SEQF5026_01837
Genome Viewer
NA
AA
897/299
79501-80397
Foldase protein PrsA
SEQF5026|JADGKX010000009.1
SEQF5026_01836
Genome Viewer
NA
AA
6822/2274
79214-72393
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01835
Genome Viewer
NA
AA
5877/1959
66412-72288
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01834
Genome Viewer
NA
AA
1926/642
64258-66183
Copper-exporting P-type ATPase
SEQF5026|JADGKX010000009.1
SEQF5026_01833
Genome Viewer
NA
AA
288/96
63971-64258
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01832
Genome Viewer
NA
AA
378/126
63576-63953
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01831
Genome Viewer
NA
AA
435/145
63129-63563
Transcriptional repressor CopY
SEQF5026|JADGKX010000009.1
SEQF5026_01830
Genome Viewer
NA
AA
558/186
62971-62414
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01829
Genome Viewer
NA
AA
546/182
62392-61847
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01828
Genome Viewer
NA
AA
414/138
61351-61764
Peptide deformylase
SEQF5026|JADGKX010000009.1
SEQF5026_01827
Genome Viewer
NA
AA
486/162
60801-61286
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01826
Genome Viewer
NA
AA
1314/438
59380-60693
Guanine/hypoxanthine permease PbuG
SEQF5026|JADGKX010000009.1
SEQF5026_01825
Genome Viewer
NA
AA
1311/437
57792-59102
Guanine/hypoxanthine permease PbuG
SEQF5026|JADGKX010000009.1
SEQF5026_01824
Genome Viewer
NA
AA
735/245
57487-56753
hypothetical protein
SEQF5026|JADGKX010000009.1
SEQF5026_01823
Genome Viewer
NA
AA
1311/437
55357-56667
Guanine/hypoxanthine permease PbuG
SEQF5026|JADGKX010000009.1
SEQF5026_01822
Genome Viewer
NA
AA
1239/413
55114-53876
Lactate 2-monooxygenase
Items 1 - 20
🡆
click arrow to navigate by page or
of 89 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by